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P. Ciuciu, J. B. Poline, G. Marrelec, J. Idier, C. Pallier, H. Benali. Unsupervised robust nonparametric estimation of the hemodynamic response function for any fMRI experiment. IEEE Trans Med Imaging, 22(10):1235-1251, 2003.


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This paper deals with the estimation of the blood oxygen level-dependent response to a stimulus, as measured in functional magnetic resonance imaging (fMRI) data. A precise estimation is essential for a better understanding of cerebral activations. The most recent works have used a nonparametric framework for this estimation, considering each brain region as a system characterized by its impulse response, the so-called hemodynamic response function (HRF). However, the use of these techniques has remained limited since they are not well-adapted to real fMRI data. Here, we develop a threefold extension to previous works. We consider asynchronous event-related paradigms, account for different trial types and integrate several fMRI sessions into the estimation. These generalizations are simultaneously addressed through a badly conditioned observation model. Bayesian formalism is used to model temporal prior information of the underlying physiological process of the brain hemodynamic response. By this way, the HRF estimate results from a tradeoff between information brought by the data and by our prior knowledge. This tradeoff is modeled with hyperparameters that are set to the maximum-likelihood estimate using an expectation conditional maximization algorithm. The proposed unsupervised approach is validated on both synthetic and real fMRI data, the latter originating from a speech perception experiment


[ *algorithms ] [ Brain/*blood supply/*physiology ] [ Brain mapping/*methods ] [ Cerebrovascular circulation/physiology ] [ Comparative study ] [ Computer simulation ] [ Hemodynamic processes/physiology ] [ Human ] [ Image interpretation ] [ Computer-assisted/*methods ] [ Imaging ] [ Three-dimensional/*methods ] [ Likelihood functions ] [ Magnetic resonance imaging/*methods ] [ *models ] [ Cardiovascular ] [ Models ] [ Statistical ] [ Reproducibility of results ] [ Sensitivity and specificity ] [ Speech perception/physiology ] [ Support ] [ Non-u.s. gov't ]


P. Ciuciu
J. B. Poline
G. Marrelec
J. Idier
C. Pallier
H. Benali

BibTex Reference

   Author = {Ciuciu, P. and Poline, J. B. and Marrelec, G. and Idier, J. and Pallier, C. and Benali, H.},
   Title = {Unsupervised robust nonparametric estimation of the hemodynamic response function for any f{MRI} experiment},
   Journal = {IEEE Trans Med Imaging},
   Volume = {22},
   Number = {10},
   Pages = {1235--1251},
   Year = {2003}

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